The Scale-Free Dynamics of Eukaryotic Cells

JOURNAL ARTICLE published 4 November 2008 in PLoS ONE

Authors: Miguel A. Aon | Marc R. Roussel | Sonia Cortassa | Brian O'Rourke | Douglas B. Murray | Manfred Beckmann | David Lloyd

Editors: Eshel Ben-Jacob

Mitochondrial respiration and ROS emission during β-oxidation in the heart: An experimental-computational study

JOURNAL ARTICLE published 9 June 2017 in PLOS Computational Biology

Authors: Sonia Cortassa | Steven J. Sollott | Miguel A. Aon

Editors: Andrew D. McCulloch

A Reaction-Diffusion Model of ROS-Induced ROS Release in a Mitochondrial Network

JOURNAL ARTICLE published 29 January 2010 in PLoS Computational Biology

Authors: Lufang Zhou | Miguel A. Aon | Tabish Almas | Sonia Cortassa | Raimond L. Winslow | Brian O'Rourke

Editors: Daniel A. Beard

Multi-cell ECM compaction is predictable via superposition of nonlinear cell dynamics linearized in augmented state space

JOURNAL ARTICLE published 20 September 2019 in PLOS Computational Biology

Authors: Michaëlle N. Mayalu | Min-Cheol Kim | H. Harry Asada

Editors: Philip K Maini

Slow diffusive dynamics in a chaotic balanced neural network

JOURNAL ARTICLE published 1 May 2017 in PLOS Computational Biology

Research funded by Israel Science Foundation (1733/13) | Israel Science Foundation (1978/13)

Authors: Nimrod Shaham | Yoram Burak

Editors: Lyle J. Graham

Local negative feedback of Rac activity at the leading edge underlies a pilot pseudopod-like program for amoeboid cell guidance

JOURNAL ARTICLE published 25 September 2023 in PLOS Biology

Research funded by National Institute of General Medical Sciences (GM118167) | National Science Foundation (2019598) | National Science Foundation (DBI- 1548297) | Novo Nordisk Fonden (NNF17OC0028176)

Authors: Jason P. Town | Orion D. Weiner

Editors: Laura Machesky

Chaotic dynamics in spatially distributed neuronal networks generate population-wide shared variability

JOURNAL ARTICLE published 10 January 2023 in PLOS Computational Biology

Research funded by National Institute of Neurological Disorders and Stroke (R01NS121913) | Division of Mathematical Sciences (1951099)

Authors: Noga Mosheiff | Bard Ermentrout | Chengcheng Huang

Editors: Hugues Berry

A Single-Rate Context-Dependent Learning Process Underlies Rapid Adaptation to Familiar Object Dynamics

JOURNAL ARTICLE published 29 September 2011 in PLoS Computational Biology

Authors: James N. Ingram | Ian S. Howard | J. Randall Flanagan | Daniel M. Wolpert

Editors: Jörn Diedrichsen

The Complexity of Dynamics in Small Neural Circuits

JOURNAL ARTICLE published 5 August 2016 in PLOS Computational Biology

Research funded by Autonomous Province of Trento (Grandi Progetti 2012 ATTEND) | Seventh Framework Programme (FP7-600954) | Seventh Framework Programme (FP7-ICT-2011.9.11/284553)

Authors: Diego Fasoli | Anna Cattani | Stefano Panzeri

Editors: Bard Ermentrout

Variability in the Control of Cell Division Underlies Sepal Epidermal Patterning in Arabidopsis thaliana

JOURNAL ARTICLE published 11 May 2010 in PLoS Biology

Authors: Adrienne H. K. Roeder | Vijay Chickarmane | Alexandre Cunha | Boguslaw Obara | B. S. Manjunath | Elliot M. Meyerowitz

Editors: Enrico Coen

How single neuron properties shape chaotic dynamics and signal transmission in random neural networks

JOURNAL ARTICLE published 10 June 2019 in PLOS Computational Biology

Research funded by Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (200020_165538)

Authors: Samuel P. Muscinelli | Wulfram Gerstner | Tilo Schwalger

Editors: Peter E. Latham

Age-differentiated incentives for adaptive behavior during epidemics produce oscillatory and chaotic dynamics

JOURNAL ARTICLE published 5 September 2023 in PLOS Computational Biology

Research funded by John Templeton Foundation (61809)

Authors: Ronan F. Arthur | May Levin | Alexandre Labrogere | Marcus W. Feldman

Editors: Feng Fu

Host contact dynamics shapes richness and dominance of pathogen strains

JOURNAL ARTICLE published 21 May 2019 in PLOS Computational Biology

Authors: Francesco Pinotti | Éric Fleury | Didier Guillemot | Pierre-Yves Böelle | Chiara Poletto

Editors: James Lloyd-Smith

Correction: Cell Fate Reprogramming by Control of Intracellular Network Dynamics

JOURNAL ARTICLE published 23 December 2015 in PLOS Computational Biology

Authors: The PLOS Computational Biology Staff

Biological complexity facilitates tuning of the neuronal parameter space

JOURNAL ARTICLE published 3 July 2023 in PLOS Computational Biology

Research funded by BMBF (01GQ1406) | BMBF (No. 031L0229)

Authors: Marius Schneider | Alexander D. Bird | Albert Gidon | Jochen Triesch | Peter Jedlicka | Hermann Cuntz

Editors: Joanna Jędrzejewska-Szmek

Cell Lineage Determination in State Space: A Systems View Brings Flexibility to Dogmatic Canonical Rules

JOURNAL ARTICLE published 25 May 2010 in PLoS Biology

Authors: Sui Huang

Estimation of temporal covariances in pathogen dynamics using Bayesian multivariate autoregressive models

JOURNAL ARTICLE published 13 December 2019 in PLOS Computational Biology

Research funded by Medical Research Council of the United Kingdom (MC_UU_12014/9) | BBSRC (BB/K01126X/1, BB/L004070/1, BB/L018926/1, BB/N013336/1, BB/R012679/1) | Food Standards Agency (FS101055) | Scottish Government Rural and Environment Science and Analytical Services Division (EPIC) | National Science Foundation (DEB1216040)

Authors: Colette Mair | Sema Nickbakhsh | Richard Reeve | Jim McMenamin | Arlene Reynolds | Rory N. Gunson | Pablo R. Murcia | Louise Matthews

Editors: James Lloyd-Smith

Graph topological transformations in space-filling cell aggregates

JOURNAL ARTICLE published 14 May 2024 in PLOS Computational Biology

Research funded by Javna Agencija za Raziskovalno Dejavnost RS (J1-3009 and P1-0055)

Authors: Tanmoy Sarkar | Matej Krajnc

Editors: Changbong Hyeon

Modelling T cell proliferation: Dynamics heterogeneity depending on cell differentiation, age, and genetic background

JOURNAL ARTICLE published 13 March 2017 in PLOS Computational Biology

Research funded by CNRS (Programme Interdisciplinaire Longévité & Vieillissement) | INSERM (ATC Vieillissement) | Investissements d’Avenir program (ANR-11-IDEX-0004-02) | CNRS (PEPS BMI)

Authors: Julien Vibert | Véronique Thomas-Vaslin

Editors: Becca Asquith

Cell Groups Reveal Structure of Stimulus Space

JOURNAL ARTICLE published 31 October 2008 in PLoS Computational Biology

Authors: Carina Curto | Vladimir Itskov

Editors: Karl J. Friston